Description : not classified & original description: none
Gene families : OG0002016 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002016_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g28280 | |
Cluster | HCCA: Cluster_141 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00018p00254940 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00031p00165100 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Adi_g109709 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g01926 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g07964 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g12057 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g03682 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g06130.1 | LOC_Os10g06130 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Len_g02845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10435174g0010 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Mp1g12580.1 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
Ore_g08658 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g03402 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g57087 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044093 | positive regulation of molecular function | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
BP | GO:0110154 | RNA decapping | IEP | HCCA |
BP | GO:0110156 | methylguanosine-cap decapping | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 204 | 274 |
No external refs found! |