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  5. Sam_g28257

Sam_g28257


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000517_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28257

Target Alias Description ECC score Gene Family Method Actions
AT5G64790 No alias O-Glycosyl hydrolases family 17 protein 0.03 OrthoFinder output from all 47 species
Adi_g016822 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23347 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03119 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11947 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12410 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31391 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04568.t1 Aspi01Gene04568 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60070.t1 Aspi01Gene60070 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0041.g026803 No alias EC_3.2 glycosylase & original description: CDS=132-1649 0.05 OrthoFinder output from all 47 species
Azfi_s0213.g058239 No alias EC_3.2 glycosylase & original description: CDS=1-1545 0.04 OrthoFinder output from all 47 species
Cba_g01002 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G079400.1 Ceric.02G079400 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G060300.1 Ceric.15G060300 EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.26G028400.1 Ceric.26G028400 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os02g04670.1 LOC_Os02g04670 Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g45390.1 LOC_Os03g45390 Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os11g36940.1 LOC_Os11g36940 Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g12499 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10437110g0020 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g10586 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37842 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04467 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31780 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000853 No alias EC_3.2 glycosylase & original description: CDS=364-1887 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006168 No alias EC_3.2 glycosylase & original description: CDS=48-1523 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015618 No alias EC_3.2 glycosylase & original description: CDS=1-1770 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0098.g019496 No alias EC_3.2 glycosylase & original description: CDS=1-1464 0.02 OrthoFinder output from all 47 species
Smo86140 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g10734 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24557 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38789 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05543 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033665_P001 Zm00001e033665 Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012946 X8 369 439
IPR000490 Glyco_hydro_17 29 348
No external refs found!