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  5. Sam_g28172

Sam_g28172


Description : O-fucosyltransferase *(SPY) & original description: none


Gene families : OG0004025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00132210 SPY,... Protein modification.O-linked... 0.02 OrthoFinder output from all 47 species
AT3G11540 SPY Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g018483 SPY O-fucosyltransferase *(SPY) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09500 SPY O-fucosyltransferase *(SPY) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06790 SPY not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07250 SPY not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04495 SPY O-fucosyltransferase *(SPY) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G099800.1 SPY, Ceric.09G099800 O-fucosyltransferase *(SPY) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g04113 SPY O-fucosyltransferase *(SPY) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09379 SPY not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033891001 SPY Protein modification.O-linked... 0.04 OrthoFinder output from all 47 species
Gb_26071 SPY O-fucosyltransferase (SPY) 0.05 OrthoFinder output from all 47 species
LOC_Os08g44510.1 SPY, LOC_Os08g44510 O-fucosyltransferase (SPY) 0.02 OrthoFinder output from all 47 species
MA_20392g0020 SPY Probable UDP-N-acetylglucosamine--peptide... 0.02 OrthoFinder output from all 47 species
MA_6269441g0010 SPY Probable UDP-N-acetylglucosamine--peptide... 0.01 OrthoFinder output from all 47 species
Mp4g23440.1 SPY O-fucosyltransferase (SPY) 0.03 OrthoFinder output from all 47 species
Spa_g39828 SPY O-fucosyltransferase *(SPY) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003920_P001 SPY, Zm00001e003920 O-fucosyltransferase (SPY) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR029489 OGT/SEC/SPY_C 505 664
IPR029489 OGT/SEC/SPY_C 684 857
IPR001440 TPR_1 217 248
IPR001440 TPR_1 429 460
IPR001440 TPR_1 251 284
IPR001440 TPR_1 360 393
IPR001440 TPR_1 326 359
No external refs found!