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  5. Sam_g28118

Sam_g28118


Description : not classified & original description: none


Gene families : OG0005882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005882_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g28118
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Dcu_g31725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50511 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51830 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g26474 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g33465 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g39841 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g33440 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g08243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g15688 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g27609 No alias calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g36596 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g43109 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g48254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 100 147
No external refs found!