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  5. Sam_g27960

Sam_g27960


Description : not classified & original description: none


Gene families : OG0000105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27960
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00202150 evm_27.TU.AmTr_v1... Lipid metabolism.lipid degradation.triacylglycerol... 0.02 OrthoFinder output from all 47 species
AT3G55180 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G11650 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g23849 No alias monoacylglycerol lipase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28588 No alias monoacylglycerol lipase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08009.t1 Aspi01Gene08009 monoacylglycerol lipase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26775.t1 Aspi01Gene26775 monoacylglycerol lipase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60364.t1 Aspi01Gene60364 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030712 No alias monoacylglycerol lipase & original description: CDS=1-873 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043399 No alias not classified & original description: CDS=458-1708 0.03 OrthoFinder output from all 47 species
Ceric.18G043200.1 Ceric.18G043200 not classified & original description: pacid=50621463... 0.03 OrthoFinder output from all 47 species
Ceric.23G032800.1 Ceric.23G032800 monoacylglycerol lipase & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000821.58 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g01603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07530 No alias monoacylglycerol lipase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031026001 No alias Caffeoylshikimate esterase OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_12903 No alias Caffeoylshikimate esterase OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g10250.1 LOC_Os01g10250 Caffeoylshikimate esterase OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g29974.1 LOC_Os05g29974 monoacylglycerol lipase 0.02 OrthoFinder output from all 47 species
LOC_Os10g04620.1 LOC_Os10g04620 Caffeoylshikimate esterase OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g16180.1 LOC_Os12g16180 monoacylglycerol lipase 0.04 OrthoFinder output from all 47 species
MA_10126084g0010 No alias monoacylglycerol lipase 0.01 OrthoFinder output from all 47 species
MA_884760g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g01856 No alias monoacylglycerol lipase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09334 No alias monoacylglycerol lipase & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g32317 No alias monoacylglycerol lipase & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026436 No alias not classified & original description: CDS=1-1038 0.02 OrthoFinder output from all 47 species
Solyc05g056000.3.1 Solyc05g056000 Caffeoylshikimate esterase OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc08g066440.3.1 Solyc08g066440 Caffeoylshikimate esterase OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e005497_P001 Zm00001e005497 Caffeoylshikimate esterase OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e016510_P003 Zm00001e016510 Caffeoylshikimate esterase OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR022742 Hydrolase_4 203 441
No external refs found!