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  5. Sam_g27883

Sam_g27883


Description : heavy chain of Dynein microtubule-based motor protein complex & original description: none


Gene families : OG0000220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27883

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene14209.t1 Aspi01Gene14209 heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011391 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Cba_g72618 No alias heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Cre06.g265950 No alias Cytoskeleton.microtubular network.Dynein... 0.03 OrthoFinder output from all 47 species
Dde_g19603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_31248 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014875 ATRBL14, RBL14 heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022640 No alias heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR013602 Dynein_heavy_linker 2 161
IPR041589 DNAH3_AAA_lid_1 1155 1228
IPR004273 Dynein_heavy_D6_P-loop 2424 2536
IPR035699 AAA_6 289 615
IPR041466 Dynein_AAA5_ext 782 936
IPR041658 AAA_lid_11 2572 2711
IPR041228 Dynein_C 2717 3018
IPR024317 Dynein_heavy_chain_D4_dom 1313 1572
IPR024743 Dynein_HC_stalk 1586 1930
IPR035706 AAA_9 1959 2180
No external refs found!