Sam_g27825


Description : not classified & original description: none


Gene families : OG0000119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27825

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene20159.t1 Aspi01Gene20159 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53776.t1 Aspi01Gene53776 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019737 No alias not classified & original description: CDS=1-840 0.03 OrthoFinder output from all 47 species
Tin_g39796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!