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  5. Sam_g27722

Sam_g27722


Description : not classified & original description: none


Gene families : OG0001730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27722

Target Alias Description ECC score Gene Family Method Actions
AT1G53800 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Adi_g082674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27907.t1 Aspi01Gene27907 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g60241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.38G064400.1 Ceric.38G064400 not classified & original description: pacid=50580479... 0.03 OrthoFinder output from all 47 species
Dac_g20282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012057 No alias not classified & original description: CDS=33-1778 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017240 No alias not classified & original description: CDS=46-1284 0.02 OrthoFinder output from all 47 species
Zm00001e032593_P001 Zm00001e032593 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR003611 NUMOD3 261 289
No external refs found!