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  5. Sam_g27554

Sam_g27554


Description : not classified & original description: none


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27554
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00218650 ARA12,... Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00024p00243520 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AMTR_s00068p00149940 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT4G30020 No alias PA-domain containing subtilase family protein 0.03 OrthoFinder output from all 47 species
AT5G67090 No alias Subtilisin-like serine endopeptidase family protein 0.02 OrthoFinder output from all 47 species
Aev_g06737 ATSBT1.3, SBT1.3 protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02600 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08790 AIR3 protease *(SBT5) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10769 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63296.t1 SLP3, Aspi01Gene63296 protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G033200.1 ARA12, Ceric.09G033200 protease *(SBT1) & original description: pacid=50588563... 0.03 OrthoFinder output from all 47 species
Dac_g10623 No alias protease *(SBT2) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g15952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29321 No alias protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07735 ARA12 protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07870 SLP3 protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009474001 No alias Subtilisin-like protease SBT1.9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01010871001 SLP3 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01028051001 No alias Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g56320.1 LOC_Os01g56320 protease (SBT2) 0.03 OrthoFinder output from all 47 species
LOC_Os09g36110.1 LOC_Os09g36110 protease (SBT3) 0.02 OrthoFinder output from all 47 species
Len_g14355 No alias protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27898 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31305 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01290 No alias protease *(SBT5) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09771 No alias protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44444 SLP3 protease *(SBT2) & original description: none 0.03 OrthoFinder output from all 47 species
Smo415166 No alias Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Solyc02g030120.3.1 Solyc02g030120 Subtilisin-like protease SBT2.1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g030130.4.1 Solyc02g030130 protease (SBT2) 0.05 OrthoFinder output from all 47 species
Solyc04g078110.1.1 ARA12, Solyc04g078110 protease (SBT1) 0.02 OrthoFinder output from all 47 species
Solyc08g079920.2.1 ARA12, Solyc08g079920 Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g079970.2.1 ARA12, Solyc08g079970 Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g10609 No alias protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010225_P003 Zm00001e010225 protease (SBT3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 408 481
IPR000209 Peptidase_S8/S53_dom 150 596
IPR010259 S8pro/Inhibitor_I9 42 122
IPR041469 Subtilisin-like_FN3 679 773
No external refs found!