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  5. Sam_g27264

Sam_g27264


Description : VOZ-type transcription factor & original description: none


Gene families : OG0003710 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003710_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27264

Target Alias Description ECC score Gene Family Method Actions
MA_69872g0010 ATVOZ1, VOZ1 transcription factor (VOZ) 0.02 OrthoFinder output from all 47 species
Pir_g36828 ATVOZ1, VOZ1 VOZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077450.3.1 ATVOZ1, VOZ1,... transcription factor (VOZ) 0.02 OrthoFinder output from all 47 species
Zm00001e019843_P002 ATVOZ1, VOZ1,... transcription factor (VOZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!