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  5. Sam_g27021

Sam_g27021


Description : Hsp60-co-chaperone *(Hsp10) & original description: none


Gene families : OG0001167 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g27021
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00144290 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AT1G14980 CPN10 chaperonin 10 0.03 OrthoFinder output from all 47 species
Adi_g072385 No alias Hsp60-co-chaperone *(Hsp10) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g127328 No alias Hsp60-co-chaperone *(Hsp10) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g41147 CPN10 Hsp60-co-chaperone *(Hsp10) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43918 CPN10 Hsp60-co-chaperone *(Hsp10) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02504 No alias Hsp60-co-chaperone *(Hsp10) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g47279 CPN10 Hsp60-co-chaperone *(Hsp10) & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0033.g025028 No alias Hsp60-co-chaperone *(Hsp10) & original description: CDS=205-501 0.03 OrthoFinder output from all 47 species
Cba_g20938 No alias Hsp60-co-chaperone *(Hsp10) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G013200.1 CPN10, Ceric.20G013200 Hsp60-co-chaperone *(Hsp10) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g13056 No alias Hsp60-co-chaperone *(Hsp10) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31894 No alias Hsp60-co-chaperone *(Hsp10) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28397 CPN10 Hsp60-co-chaperone *(Hsp10) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014389 No alias Hsp60-co-chaperone *(Hsp10) & original description: CDS=1-354 0.03 OrthoFinder output from all 47 species
Sam_g10868 No alias Hsp60-co-chaperone *(Hsp10) & original description: none 0.11 OrthoFinder output from all 47 species
Sam_g40940 No alias Hsp60-co-chaperone *(Hsp10) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46245 No alias Hsp60-co-chaperone *(Hsp10) & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0140662 ATP-dependent protein folding chaperone IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003785 actin monomer binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 7 98
No external refs found!