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  5. Sam_g26873

Sam_g26873


Description : not classified & original description: none


Gene families : OG0001373 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001373_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26873
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Dcu_g09790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g23780.1 LOC_Os09g23780 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g20898 At17.1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431168g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436027g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_208513g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6869016g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g39267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034082_P002 Zm00001e034082 Uncharacterized protein At1g66480 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 10 240
No external refs found!