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  5. Sam_g26741

Sam_g26741


Description : regulatory E3 ubiquitin ligase *(RHF) & original description: none


Gene families : OG0001882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26741

Target Alias Description ECC score Gene Family Method Actions
Als_g37573 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Als_g52224 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.04 OrthoFinder output from all 47 species
Aop_g03148 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s4053.g117827 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Cba_g22945 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os11g36430.3 RHF2A, LOC_Os11g36430 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ore_g09917 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g073860.2.1 RHF2A, Solyc06g073860 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc06g073880.3.1 RHF2A, Solyc06g073880 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g24864 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e024418_P001 RHF2A, Zm00001e024418 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 61 102
No external refs found!