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  5. Sam_g26734

Sam_g26734


Description : ribosomal protein arginine N-methyltransferase *(PRMT3) & original description: none


Gene families : OG0001088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26734

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00239020 ATPRMT11,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00048830 PRMT3, ATPRMT3,... Protein biosynthesis.cytosolic ribosome.ribosome... 0.02 OrthoFinder output from all 47 species
AT2G19670 PRMT1A, ATPRMT1A protein arginine methyltransferase 1A 0.03 OrthoFinder output from all 47 species
AT3G12270 PRMT3, ATPRMT3 protein arginine methyltransferase 3 0.03 OrthoFinder output from all 47 species
AT3G20020 ATPRMT6, PRMT6 protein arginine methyltransferase 6 0.02 OrthoFinder output from all 47 species
AT4G29510 ATPRMT11,... arginine methyltransferase 11 0.02 OrthoFinder output from all 47 species
Adi_g056068 ATPRMT6, PRMT6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078470 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22341 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.02 OrthoFinder output from all 47 species
Aob_g01902 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.03 OrthoFinder output from all 47 species
Aop_g10678 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.02 OrthoFinder output from all 47 species
Aop_g13913 ATPRMT6, PRMT6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G067400.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.03 OrthoFinder output from all 47 species
Ceric.36G007700.1 ATPRMT11,... histone methylase *(PRMT1) & original description:... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000405.18 ATPRMT11,... Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001049.36 PRMT1A, ATPRMT1A Probable protein arginine N-methyltransferase 1.2... 0.02 OrthoFinder output from all 47 species
Cre16.g685900 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.03 OrthoFinder output from all 47 species
Dac_g03698 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036648001 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.03 OrthoFinder output from all 47 species
Gb_03001 ATPRMT6, PRMT6 Probable protein arginine N-methyltransferase 6... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58060.1 ATPRMT6, PRMT6,... Probable protein arginine N-methyltransferase 6.1... 0.02 OrthoFinder output from all 47 species
LOC_Os07g44640.1 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.03 OrthoFinder output from all 47 species
LOC_Os09g19560.1 ATPRMT11,... histone methylase (PRMT1) 0.03 OrthoFinder output from all 47 species
Mp5g00320.1 ATPRMT11,... histone methylase (PRMT1) 0.02 OrthoFinder output from all 47 species
Mp5g14740.1 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase (PRMT3) 0.03 OrthoFinder output from all 47 species
Nbi_g14208 PRMT3, ATPRMT3 ribosomal protein arginine N-methyltransferase *(PRMT3)... 0.03 OrthoFinder output from all 47 species
Pir_g12856 ATPRMT11,... histone methylase *(PRMT1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018602 ATPRMT11,... histone methylase *(PRMT1) & original description: CDS=1-1554 0.03 OrthoFinder output from all 47 species
Smo95789 PRMT3, ATPRMT3 Protein biosynthesis.cytosolic ribosome.ribosome... 0.02 OrthoFinder output from all 47 species
Solyc12g008760.3.1 ATPRMT11,... histone methylase (PRMT1) 0.02 OrthoFinder output from all 47 species
Zm00001e033500_P001 PRMT3, ATPRMT3,... ribosomal protein arginine N-methyltransferase (PRMT3) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041698 Methyltransf_25 352 463
IPR041661 ZN622/Rei1/Reh1_Znf-C2H2 72 146
No external refs found!