1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g26565

Sam_g26565


Description : adaptor protein exchange factor *(CAND1) & original description: none


Gene families : OG0003255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003255_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26565
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00129340 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Aev_g04885 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g14845 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g36152 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.05G074400.1 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Gb_04165 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.02 OrthoFinder output from all 47 species
LOC_Os02g07120.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.06 OrthoFinder output from all 47 species
MA_15038g0010 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.02 OrthoFinder output from all 47 species
Mp1g02440.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.03 OrthoFinder output from all 47 species
Ppi_g17423 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Smo165037 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc01g103010.4.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.02 OrthoFinder output from all 47 species
Spa_g26194 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Tin_g01276 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e025157_P002 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051879 Hsp90 protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013932 TATA-bd_TIP120 1045 1207
No external refs found!