Sam_g26559

Description : pre-mRNA splicing factor *(RBM25) & original description: none

Gene families : OG0002875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002875_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g26559
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
Aev_g46746	No alias	pre-mRNA splicing factor *(RBM25) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g56861	No alias	pre-mRNA splicing factor *(RBM25) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g17534	No alias	pre-mRNA splicing factor *(RBM25) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g09390	No alias	pre-mRNA splicing factor *(RBM25) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g39469	No alias	pre-mRNA splicing factor *(RBM25) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008569	minus-end-directed microtubule motor activity	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
CC	GO:0030286	dynein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	107	174
IPR002483	PWI_dom	731	794

External Links

No external refs found!