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  5. Sam_g26556

Sam_g26556


Description : regulatory protein (ARC6) of plastid division FtsZ assembly & original description: none


Gene families : OG0002917 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002917_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26556

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00037730 ARC6,... Cell cycle.organelle machineries.organelle... 0.02 OrthoFinder output from all 47 species
AT5G42480 ARC6 Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
Azfi_s0371.g067108 ARC6 regulatory protein (ARC6) of plastid division FtsZ... 0.03 OrthoFinder output from all 47 species
Cba_g03333 ARC6 regulatory protein (ARC6) of plastid division FtsZ... 0.02 OrthoFinder output from all 47 species
Ceric.39G026700.1 ARC6, Ceric.39G026700 regulatory protein (ARC6) of plastid division FtsZ... 0.03 OrthoFinder output from all 47 species
Cre12.g488500 ARC6 Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6,... 0.01 OrthoFinder output from all 47 species
LOC_Os02g03000.2 ARC6, LOC_Os02g03000 ARC6 plastid division FtsZ assembly regulator 0.02 OrthoFinder output from all 47 species
Len_g10113 ARC6 regulatory protein (ARC6) of plastid division FtsZ... 0.04 OrthoFinder output from all 47 species
Lfl_g05660 ARC6 regulatory protein (ARC6) of plastid division FtsZ... 0.02 OrthoFinder output from all 47 species
Nbi_g05432 ARC6 regulatory protein (ARC6) of plastid division FtsZ... 0.03 OrthoFinder output from all 47 species
Solyc04g081070.3.1 ARC6, Solyc04g081070 ARC6 plastid division FtsZ assembly regulator 0.03 OrthoFinder output from all 47 species
Spa_g52672 ARC6 regulatory protein (ARC6) of plastid division FtsZ... 0.04 OrthoFinder output from all 47 species
Tin_g12445 ARC6 regulatory protein (ARC6) of plastid division FtsZ... 0.03 OrthoFinder output from all 47 species
Zm00001e025265_P001 ARC6, Zm00001e025265 ARC6 plastid division FtsZ assembly regulator 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025344 ARC6-like_IMS 677 793
No external refs found!