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  5. Sam_g26378

Sam_g26378


Description : not classified & original description: none


Gene families : OG0001189 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001189_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26378
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Ceric.21G087400.1 Ceric.21G087400 not classified & original description: pacid=50604400... 0.05 OrthoFinder output from all 47 species
Dac_g41903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g32125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38987 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g16124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12672 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR007743 Immunity-related_GTPase-like 86 207
No external refs found!