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  5. Sam_g26314

Sam_g26314


Description : not classified & original description: none


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26314

Target Alias Description ECC score Gene Family Method Actions
Aob_g01806 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G012000.1 Ceric.38G012000 not classified & original description: pacid=50579791... 0.04 OrthoFinder output from all 47 species
Ore_g23447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30390 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ore_g32193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c2_20350V3.1 Pp3c2_20350 Zinc finger (CCCH-type) family protein 0.02 OrthoFinder output from all 47 species
Ppi_g17330 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000115 No alias platform ATPase CDC48 & original description: CDS=3649-4851 0.02 OrthoFinder output from all 47 species
Solyc06g072720.3.1 Solyc06g072720 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 124 148
IPR041367 Znf-CCCH_4 187 208
No external refs found!