Sam_g26169


Description : storage vacuole protein sorting receptor *(RMR) & original description: none


Gene families : OG0000625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26169
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0314.g064234 No alias storage vacuole protein sorting receptor *(RMR) &... 0.06 OrthoFinder output from all 47 species
Ceric.15G051900.1 Ceric.15G051900 storage vacuole protein sorting receptor *(RMR) &... 0.04 OrthoFinder output from all 47 species
Cre16.g680117 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dcu_g05499 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
Dcu_g14669 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Dde_g02702 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Ehy_g05657 No alias storage vacuole protein sorting receptor *(RMR) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01034782001 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
Lfl_g34073 No alias storage vacuole protein sorting receptor *(RMR) &... 0.04 OrthoFinder output from all 47 species
Mp4g04900.1 No alias vacuolar sorting receptor (RMR) 0.05 OrthoFinder output from all 47 species
Msp_g07222 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Pir_g11185 No alias storage vacuole protein sorting receptor *(RMR) &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005132 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 97 160
IPR001841 Znf_RING 249 293
No external refs found!