Description : component *(RFC1) of PCNA sliding clamp loader complex & original description: none
Gene families : OG0004063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004063_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g26084 | |
Cluster | HCCA: Cluster_172 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G22010 | RFC1, AtRFC1 | replication factor C1 | 0.03 | OrthoFinder output from all 47 species | |
Dde_g21327 | RFC1, AtRFC1 | component *(RFC1) of PCNA sliding clamp loader complex &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g30113 | RFC1, AtRFC1 | component *(RFC1) of PCNA sliding clamp loader complex &... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01037357001 | RFC1, AtRFC1 | Cell cycle.interphase.DNA... | 0.03 | OrthoFinder output from all 47 species | |
Gb_23963 | RFC1, AtRFC1 | component RFC1 of PCNA sliding clamp loader complex | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g36390.1 | RFC1, AtRFC1,... | component RFC1 of PCNA sliding clamp loader complex | 0.04 | OrthoFinder output from all 47 species | |
Mp8g17270.1 | RFC1, AtRFC1 | component RFC1 of PCNA sliding clamp loader complex | 0.02 | OrthoFinder output from all 47 species | |
Ore_g44427 | RFC1, AtRFC1 | component *(RFC1) of PCNA sliding clamp loader complex &... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g06689 | RFC1, AtRFC1 | component *(RFC1) of PCNA sliding clamp loader complex &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g33328 | RFC1, AtRFC1 | component *(RFC1) of PCNA sliding clamp loader complex &... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g12206 | RFC1, AtRFC1 | component *(RFC1) of PCNA sliding clamp loader complex &... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEA | Interproscan |
BP | GO:0006260 | DNA replication | IEA | Interproscan |
CC | GO:0009360 | DNA polymerase III complex | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006302 | double-strand break repair | IEP | HCCA |
BP | GO:0006873 | cellular monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009187 | cyclic nucleotide metabolic process | IEP | HCCA |
BP | GO:0009190 | cyclic nucleotide biosynthetic process | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
BP | GO:0030003 | cellular monoatomic cation homeostasis | IEP | HCCA |
BP | GO:0030026 | cellular manganese ion homeostasis | IEP | HCCA |
MF | GO:0030145 | manganese ion binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0042592 | homeostatic process | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | HCCA |
BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0050801 | monoatomic ion homeostasis | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
BP | GO:0055071 | manganese ion homeostasis | IEP | HCCA |
BP | GO:0055076 | transition metal ion homeostasis | IEP | HCCA |
BP | GO:0055080 | monoatomic cation homeostasis | IEP | HCCA |
BP | GO:0055082 | cellular chemical homeostasis | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
No external refs found! |