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  5. Sam_g26068

Sam_g26068


Description : not classified & original description: none


Gene families : OG0001680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26068

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00103330 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G34320 No alias Protein of unknown function (DUF668) 0.02 OrthoFinder output from all 47 species
Aob_g15859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13243 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G002200.1 Ceric.05G002200 not classified & original description: pacid=50578529... 0.06 OrthoFinder output from all 47 species
Ceric.09G077000.1 Ceric.09G077000 not classified & original description: pacid=50586652... 0.03 OrthoFinder output from all 47 species
Ceric.21G071000.1 Ceric.21G071000 not classified & original description: pacid=50604391... 0.06 OrthoFinder output from all 47 species
GSVIVT01009920001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01034887001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os01g65330.1 LOC_Os01g65330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g50220.1 LOC_Os06g50220 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp1g02670.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g16439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025065 No alias not classified & original description: CDS=638-2614 0.05 OrthoFinder output from all 47 species
Smo98811 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g081510.4.1 Solyc04g081510 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g065460.2.1 Solyc06g065460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g017000.2.1 Solyc11g017000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g56301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014795_P002 Zm00001e014795 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e019113_P001 Zm00001e019113 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027001_P003 Zm00001e027001 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030171_P001 Zm00001e030171 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045927 positive regulation of growth IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR007700 DUF668 359 444
IPR021864 DUF3475 136 192
No external refs found!