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  5. Sam_g25987

Sam_g25987


Description : subgroup ERF-IV/DREB2 transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25987

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00195730 DREB1B, ATCBF1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00064760 TINY2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00079p00020610 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.02 OrthoFinder output from all 47 species
Adi_g053440 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g01417 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g12762 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Als_g04224 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g07015 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Als_g10058 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10396 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g10580 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g58152 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g61303 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aob_g08822 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g05092 DEAR2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g26411 RAP2.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38397 RAP2.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03162.t1 Aspi01Gene03162 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene24390.t1 RAP2.1, Aspi01Gene24390 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24392.t1 RAP2.1, Aspi01Gene24392 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035884 No alias subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g13419 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G043300.1 Ceric.24G043300 not classified & original description: pacid=50629223... 0.02 OrthoFinder output from all 47 species
Ceric.28G013900.1 Ceric.28G013900 subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G054800.1 TINY2, Ceric.38G054800 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g06812 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g42465 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g47796 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02774 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ehy_g10951 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01013903001 No alias Ethylene-responsive transcription factor 2 OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Gb_32806 DREB2A, DREB2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g46870.1 CRF1, LOC_Os01g46870 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Len_g01640 DEAR4, RAP2.10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37062 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26716 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_198113g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_502153g0010 ATERF-9, ERF9, ATERF9 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_66969g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Msp_g19553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24161 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40972 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g12089 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g65439 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g10709 No alias subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c3_9430V3.1 ERF2, ATERF2,... ethylene responsive element binding factor 1 0.01 OrthoFinder output from all 47 species
Ppi_g05046 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g11929 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15852 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Ppi_g41606 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012398 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-1134 0.03 OrthoFinder output from all 47 species
Spa_g09063 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g09064 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g15143 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g11043 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Tin_g37433 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e006692_P001 Zm00001e006692 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e007332_P001 Zm00001e007332 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e013927_P001 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e025064_P001 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e026573_P001 Zm00001e026573 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e029878_P001 DREB1A, ATCBF3,... transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e041815_P001 Zm00001e041815 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 72 120
No external refs found!