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  5. Sam_g25608

Sam_g25608


Description : amino acid transporter *(LHT) & original description: none


Gene families : OG0000789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25608
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AT1G48640 No alias Transmembrane amino acid transporter family protein 0.03 OrthoFinder output from all 47 species
AT5G39715 No alias No description available 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025973 LHT1 amino acid transporter *(LHT) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.01G051400.1 Ceric.01G051400 amino acid transporter *(LHT) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g18273 LHT1 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07414 LHT1 amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30112 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g027880.3.1 LHT1, Solyc12g027880 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Solyc12g027890.1.1 LHT1, Solyc12g027890 Lysine histidine transporter 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e029255_P001 LHT1, Zm00001e029255 Lysine histidine transporter 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 38 433
No external refs found!