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  5. Sam_g25540

Sam_g25540


Description : not classified & original description: none


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25540

Target Alias Description ECC score Gene Family Method Actions
AT3G18460 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
Ceric.11G016600.1 Ceric.11G016600 not classified & original description: pacid=50596443... 0.04 OrthoFinder output from all 47 species
Gb_02805 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_37164 No alias Cell number regulator 2 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os02g52550.1 LOC_Os02g52550 Cell number regulator 1 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
MA_8647295g0010 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e011704_P001 PCR2, Zm00001e011704 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 40 113
No external refs found!