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  5. Sam_g25484

Sam_g25484


Description : not classified & original description: none


Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25484

Target Alias Description ECC score Gene Family Method Actions
AT3G24600 No alias Late embryogenesis abundant protein, group 2 0.02 OrthoFinder output from all 47 species
Aev_g16993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39024.t1 Aspi01Gene39024 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G091500.1 Ceric.04G091500 not classified & original description: pacid=50630876... 0.03 OrthoFinder output from all 47 species
Ceric.24G024200.1 Ceric.24G024200 not classified & original description: pacid=50628716... 0.02 OrthoFinder output from all 47 species
Dac_g09294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g44740.1 LOC_Os02g44740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g59330.1 LOC_Os04g59330 microtubule-interacting component CC of cellulose... 0.02 OrthoFinder output from all 47 species
MA_10227167g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g00420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g36417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018396 No alias not classified & original description: CDS=285-692 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!