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  5. Sam_g25340

Sam_g25340


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25340

Target Alias Description ECC score Gene Family Method Actions
Aob_g32427 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Dac_g11534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022141 No alias not classified & original description: CDS=662-3931 0.03 OrthoFinder output from all 47 species
Zm00001e007456_P003 PRAF1, Zm00001e007456 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR001849 PH_domain 14 122
IPR000408 Reg_chr_condens 492 541
IPR000408 Reg_chr_condens 429 478
IPR000408 Reg_chr_condens 324 372
IPR000408 Reg_chr_condens 376 425
IPR000408 Reg_chr_condens 544 593
IPR000408 Reg_chr_condens 599 645
IPR013591 Brevis_radix_dom 1029 1084
IPR000306 Znf_FYVE 657 712
IPR027988 BRX_N 917 940
No external refs found!