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  5. Sam_g25239

Sam_g25239


Description : bZIP class-G transcription factor & original description: none


Gene families : OG0000424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25239

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00094730 GBF1,... RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
AT1G32150 bZIP68, AtbZIP68 basic region/leucine zipper transcription factor 68 0.03 OrthoFinder output from all 47 species
Adi_g088273 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33899 bZIP68, AtbZIP68 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03322 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06008 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18468 bZIP68, AtbZIP68 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49239.t2 Aspi01Gene49239 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g001017 bZIP16, AtbZIP16 not classified & original description: CDS=4-804 0.03 OrthoFinder output from all 47 species
Dde_g07493 bZIP68, AtbZIP68 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12482 bZIP16, AtbZIP16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22121 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013053001 bZIP16, AtbZIP16 RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
LOC_Os03g13614.3 bZIP16,... transcription factor (bZIP) 0.05 OrthoFinder output from all 47 species
Lfl_g04774 bZIP68, AtbZIP68 bZIP class-G transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08779 bZIP16, AtbZIP16 bZIP class-G transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_127542g0020 GBF1 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Pir_g64736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32830 bZIP16, AtbZIP16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g005290.3.1 bZIP16,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e000997_P001 bZIP16,... transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012900 MFMR 1 100
IPR004827 bZIP 290 352
No external refs found!