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Sam_g24926


Description : co-chaperone (GFA2) involved in gametogenesis & original description: none


Gene families : OG0001086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24926

Target Alias Description ECC score Gene Family Method Actions
Aop_g11999 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G032000.1 GFA2, Ceric.09G032000 co-chaperone *(Hsp40) & original description:... 0.06 OrthoFinder output from all 47 species
Cre12.g551500 GFA2 Chaperone protein dnaJ A6, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g36392 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g07060.1 GFA2, LOC_Os12g07060 co-chaperone (Hsp40) 0.05 OrthoFinder output from all 47 species
Lfl_g01756 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03107 GFA2 co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03342 GFA2 co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 65 127
IPR001305 HSP_DnaJ_Cys-rich_dom 209 270
IPR002939 DnaJ_C 182 396
No external refs found!