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  5. Sam_g24621

Sam_g24621


Description : not classified & original description: none


Gene families : OG0000414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24621

Target Alias Description ECC score Gene Family Method Actions
Ala_g22001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g26084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 60 80
IPR002885 Pentatricopeptide_repeat 88 117
No external refs found!