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  5. Sam_g24536

Sam_g24536


Description : transcription factor *(NIN) & original description: none


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24536
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00148680 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AT4G24020 NLP7 NIN like protein 7 0.03 OrthoFinder output from all 47 species
Aev_g13389 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44227 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G009600.1 Ceric.07G009600 transcription factor *(NIN) & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g12485 No alias transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038090001 No alias External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
Pir_g04867 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29425 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53032 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07566 No alias transcription factor *(NIN) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016364_P001 NLP7, Zm00001e016364 transcription factor (NLP). NLP6/7 nitrate response... 0.03 OrthoFinder output from all 47 species
Zm00001e041143_P001 Zm00001e041143 transcription factor (NLP). transcription factor (NIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 996 1076
IPR003035 RWP-RK_dom 679 726
No external refs found!