Sam_g24159


Description : not classified & original description: none


Gene families : OG0007811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007811_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24159
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene25785.t1 Aspi01Gene25785 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G008700.1 Ceric.37G008700 not classified & original description: pacid=50616420... 0.02 OrthoFinder output from all 47 species
Dac_g12271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g42280.1 LOC_Os05g42280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g19460 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g27110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!