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  5. Sam_g24151

Sam_g24151


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000710 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000710_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24151
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Ala_g00737 ILR3, bHLH105 transcriptional regulator *(PRI1) of transient metal... 0.02 OrthoFinder output from all 47 species
Als_g30399 ILR3, bHLH105 transcriptional regulator *(PRI1) of transient metal... 0.02 OrthoFinder output from all 47 species
Ore_g06360 ILR3, bHLH105 transcriptional regulator *(PRI1) of transient metal... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000120 RNA polymerase I transcription regulator complex IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 2 41
No external refs found!