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Sam_g24048


Description : malate dehydrogenase component of AAA-ATPase motor complex & original description: none


Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24048

Target Alias Description ECC score Gene Family Method Actions
AT1G53240 mMDH1 Lactate/malate dehydrogenase family protein 0.03 OrthoFinder output from all 47 species
Aop_g01648 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Len_g19337 mMDH1 mitochondrial NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
MA_15580g0010 mMDH1 mitochondrial NAD-dependent malate dehydrogenase 0.02 OrthoFinder output from all 47 species
Nbi_g04197 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
Solyc12g014180.2.1 mMDH2, Solyc12g014180 mitochondrial NAD-dependent malate dehydrogenase 0.04 OrthoFinder output from all 47 species
Spa_g53075 MDH not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001236 Lactate/malate_DH_N 88 230
IPR022383 Lactate/malate_DH_C 232 397
No external refs found!