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  5. Sam_g23935

Sam_g23935


Description : component *(NdhN) of NDH subcomplex A & original description: none


Gene families : OG0008641 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23935
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00172700 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 OrthoFinder output from all 47 species
AT5G58260 No alias oxidoreductases, acting on NADH or NADPH, quinone or... 0.04 OrthoFinder output from all 47 species
Ala_g04294 No alias component *(NdhN) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Aop_g18163 No alias component *(NdhN) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Dac_g08813 No alias component *(NdhN) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g66000.1 LOC_Os01g66000 component NdhN of NDH subcomplex A 0.02 OrthoFinder output from all 47 species
Nbi_g01728 No alias component *(NdhN) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Ore_g11082 No alias component *(NdhN) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021202 No alias component *(NdhN) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Sam_g23936 No alias component *(NdhN) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Spa_g00662 No alias component *(NdhN) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Tin_g04410 No alias component *(NdhN) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Zm00001e019059_P001 Zm00001e019059 component NdhN of NDH subcomplex A 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020874 NAD(P)H-quinone_OxRdtase_su_N 81 218
No external refs found!