Sam_g23519


Description : not classified & original description: none


Gene families : OG0006009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006009_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23519
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Adi_g079437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g51930.1 LOC_Os03g51930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g17190.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0732.g027662 No alias not classified & original description: CDS=45-839 0.04 OrthoFinder output from all 47 species
Zm00001e005556_P001 Zm00001e005556 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR021414 DUF3054 121 230
No external refs found!