Sam_g23323


Description : not classified & original description: none


Gene families : OG0000230 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000230_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23323
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT4G23700 CHX17, ATCHX17 cation/H+ exchanger 17 0.02 OrthoFinder output from all 47 species
Aev_g25670 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Ala_g21600 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Aob_g07412 ATCHX20, CHX20 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
Aop_g11687 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53283.t1 ATCHX19, CHX19,... proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010241 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.04 OrthoFinder output from all 47 species
Ceric.20G022500.1 ATCHX19, CHX19,... proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G040500.1 ATCHX19, CHX19,... proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01034209001 ATCHX20, CHX20 Solute transport.carrier-mediated transport.CPA... 0.04 OrthoFinder output from all 47 species
Len_g44404 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.02 OrthoFinder output from all 47 species
MA_43901g0010 ATCHX20, CHX20 Cation/H(+) antiporter 20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_5796458g0010 ATCHX20, CHX20 Cation/H(+) antiporter 20 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g10490.1 ATCHX18, CHX18 proton:monovalent cation antiporter (CHX) 0.02 OrthoFinder output from all 47 species
Nbi_g09151 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.04 OrthoFinder output from all 47 species
Ore_g25372 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Ore_g25373 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g20464 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g18454 ATCHX20, CHX20 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g25926 ATCHX19, CHX19 proton:monovalent cation antiporter *(CHX) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019111 ATCHX20, CHX20 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019741 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Tin_g15469 ATCHX18, CHX18 proton:monovalent cation antiporter *(CHX) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003244_P001 ATCHX19, CHX19,... proton:monovalent cation antiporter (CHX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!