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  5. Sam_g23129

Sam_g23129


Description : not classified & original description: none


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23129
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00128780 DIN10,... Probable galactinol--sucrose galactosyltransferase 6... 0.02 OrthoFinder output from all 47 species
AMTR_s00103p00156250 SIP2, AtSIP2,... Probable galactinol--sucrose galactosyltransferase 2... 0.04 OrthoFinder output from all 47 species
AMTR_s00166p00055580 SIP2, AtSIP2,... Probable galactinol--sucrose galactosyltransferase 2... 0.02 OrthoFinder output from all 47 species
Aev_g13615 SIP1 stachyose synthase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01034980001 AtSTS, STS Stachyose synthase OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Pnu_g24999 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023485 SIP2, AtSIP2 not classified & original description: CDS=1-2646 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 2 169
No external refs found!