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  5. Sam_g22697

Sam_g22697


Description : glutamate-tRNA ligase & original description: none


Gene families : OG0005634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g22697
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT5G64050 ERS, OVA3, ATERS glutamate tRNA synthetase 0.03 OrthoFinder output from all 47 species
Adi_g018668 ERS, OVA3, ATERS EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g01985 ERS, OVA3, ATERS EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene27434.t1 ERS, OVA3,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene27435.t1 ERS, OVA3,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.05G077500.1 ERS, OVA3,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06320 ERS, OVA3, ATERS EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16022 ERS, OVA3, ATERS EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
LOC_Os02g02860.1 ERS, OVA3,... glutamyl-tRNA synthetase. glutamate-tRNA ligase 0.03 OrthoFinder output from all 47 species
Len_g20719 ERS, OVA3, ATERS EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Lfl_g01904 ERS, OVA3, ATERS EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
MA_311548g0010 ERS, OVA3, ATERS no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g04260.1 ERS, OVA3, ATERS glutamyl-tRNA synthetase. glutamate-tRNA ligase 0.01 OrthoFinder output from all 47 species
Msp_g09429 ERS, OVA3, ATERS EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Pir_g10270 ERS, OVA3, ATERS EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Ppi_g02261 ERS, OVA3, ATERS EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Spa_g07673 ERS, OVA3, ATERS EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!