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  5. Sam_g22334

Sam_g22334


Description : not classified & original description: none


Gene families : OG0000417 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000417_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g22334

Target Alias Description ECC score Gene Family Method Actions
AT4G01730 No alias DHHC-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g019371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g064383 No alias protein S-acyltransferase *(PAT22) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19759 No alias protein S-acyltransferase *(PAT22) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07411 No alias protein S-acyltransferase *(PAT19-21) & original... 0.03 OrthoFinder output from all 47 species
Aop_g04862 No alias protein S-acyltransferase *(PAT22) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07190.t1 Aspi01Gene07190 protein S-acyltransferase *(PAT22) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59983 No alias protein S-acyltransferase *(PAT19-21) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G002000.1 Ceric.01G002000 protein S-acyltransferase *(PAT22) & original... 0.02 OrthoFinder output from all 47 species
Ceric.01G068200.1 Ceric.01G068200 protein S-acyltransferase *(PAT22) & original... 0.04 OrthoFinder output from all 47 species
Ceric.03G025100.1 Ceric.03G025100 protein S-acyltransferase *(PAT19-21) & original... 0.02 OrthoFinder output from all 47 species
Dde_g25010 No alias protein S-acyltransferase *(PAT22) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028245001 No alias Protein S-acyltransferase 18 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os07g40480.1 LOC_Os07g40480 Probable protein S-acyltransferase 22 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os08g44230.1 LOC_Os08g44230 Probable protein S-acyltransferase 19 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g16210.1 LOC_Os12g16210 Protein S-acyltransferase 18 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g09407 No alias protein S-acyltransferase *(PAT22) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32206 No alias protein S-acyltransferase *(PAT22) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10426674g0010 No alias Probable protein S-acyltransferase 22 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g13231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05357 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02246 No alias protein S-acyltransferase *(PAT22) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010730 No alias not classified & original description: CDS=262-2382 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0177.g024642 No alias not classified & original description: CDS=1-2043 0.03 OrthoFinder output from all 47 species
Sam_g08531 No alias protein S-acyltransferase *(PAT22) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g079100.3.1 Solyc01g079100 Protein S-acyltransferase 18 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g41711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g42990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01236 No alias protein S-acyltransferase *(PAT22) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003956_P003 Zm00001e003956 Probable protein S-acyltransferase 20 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!