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  5. Lfl_g27436

Lfl_g27436


Description : not classified & original description: none


Gene families : OG0002648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g27436
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT2G14910 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.03 OrthoFinder output from all 47 species
AT5G14970 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
Adi_g009038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35156 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g07298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G007500.1 Ceric.19G007500 not classified & original description: pacid=50575409... 0.11 OrthoFinder output from all 47 species
Ehy_g07577 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os03g41080.1 LOC_Os03g41080 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g40610 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g35126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g24928 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g18525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g47474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo145704 No alias No description available 0.05 OrthoFinder output from all 47 species
Tin_g03324 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005139_P001 Zm00001e005139 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e012455_P002 Zm00001e012455 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR008479 DUF760 314 428
IPR008479 DUF760 122 203
No external refs found!