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  5. Lfl_g27422

Lfl_g27422


Description : diphthamide synthetase *(DPH6) & original description: none


Gene families : OG0005519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005519_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g27422

Target Alias Description ECC score Gene Family Method Actions
Ceric.24G004900.1 Ceric.24G004900 diphthamide synthetase *(DPH6) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g21305 No alias diphthamide synthetase *(DPH6) & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g04820.1 No alias diphthamide synthetase (DPH6) 0.03 OrthoFinder output from all 47 species
Ppi_g08408 No alias diphthamide synthetase *(DPH6) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49870 No alias diphthamide synthetase *(DPH6) & original description: none 0.04 OrthoFinder output from all 47 species
Smo130429 No alias Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
Solyc04g010080.3.1 Solyc04g010080 diphthamide synthetase (DPH6) 0.02 OrthoFinder output from all 47 species
Zm00001e016182_P003 Zm00001e016182 diphthamide synthetase (DPH6) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002761 Diphthami_syn_dom 32 258
IPR006175 YjgF/YER057c/UK114 458 580
No external refs found!