Sam_g19719


Description : not classified & original description: none


Gene families : OG0000804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000804_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19719

Target Alias Description ECC score Gene Family Method Actions
Aop_g01757 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G070900.1 CID12, ATRBP37,... not classified & original description: pacid=50605247... 0.03 OrthoFinder output from all 47 species
Dcu_g13884 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37569 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03845 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18828 CID11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09538 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17641 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo66365 CID12, ATRBP37, RBP37 Polyadenylate-binding protein-interacting protein 11... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 164 226
IPR000504 RRM_dom 261 328
No external refs found!