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  5. Sam_g19523

Sam_g19523


Description : component *(Sm-D3) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex & original description: none


Gene families : OG0003441 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003441_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19523
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Adi_g022524 No alias component *(Sm-D3) of U1/U2/U4/U5-associated Sm... 0.02 OrthoFinder output from all 47 species
Azfi_s0373.g067189 No alias component *(Sm-D3) of U1/U2/U4/U5-associated Sm... 0.02 OrthoFinder output from all 47 species
LOC_Os02g01250.1 LOC_Os02g01250 component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from all 47 species
LOC_Os03g13760.1 LOC_Os03g13760 component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from all 47 species
MA_98884g0010 No alias component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from all 47 species
Solyc02g062240.3.1 Solyc02g062240 component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species
Zm00001e001000_P001 Zm00001e001000 component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 11 74
No external refs found!