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  5. Sam_g19414

Sam_g19414


Description : not classified & original description: none


Gene families : OG0006414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19414

Target Alias Description ECC score Gene Family Method Actions
AT5G10690 No alias pentatricopeptide (PPR) repeat-containing protein / CBS... 0.03 OrthoFinder output from all 47 species
Adi_g053588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007615 No alias not classified & original description: CDS=350-1960 0.04 OrthoFinder output from all 47 species
Cba_g30853 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 240 288
IPR002885 Pentatricopeptide_repeat 167 190
IPR002885 Pentatricopeptide_repeat 401 425
IPR002885 Pentatricopeptide_repeat 320 348
No external refs found!