Description : pre-60S ribosomal-subunit proteome export factor *(ARX1) & original description: none
Gene families : OG0003188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003188_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g19099 | |
Cluster | HCCA: Cluster_145 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00167240 | EBP1, ATEBP1,... | ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum | 0.05 | OrthoFinder output from all 47 species | |
AT3G51800 | EBP1, ATEBP1, ATG2 | metallopeptidase M24 family protein | 0.09 | OrthoFinder output from all 47 species | |
Ala_g08839 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g11352 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0019.g015328 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.14 | OrthoFinder output from all 47 species | |
Cba_g06999 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.06G082300.1 | EBP1, ATEBP1,... | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.11 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000553.33 | EBP1, ATEBP1, ATG2 | ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum | 0.02 | OrthoFinder output from all 47 species | |
Cre13.g604650 | EBP1, ATEBP1, ATG2 | ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum | 0.02 | OrthoFinder output from all 47 species | |
Dac_g03227 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.07 | OrthoFinder output from all 47 species | |
Dcu_g01195 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g08408 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01003934001 | EBP1, ATEBP1, ATG2 | ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os05g28280.1 | EBP1, ATEBP1,... | pre-60S ribosomal subunit export factor (ARX1) | 0.08 | OrthoFinder output from all 47 species | |
Len_g16054 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.05 | OrthoFinder output from all 47 species | |
MA_10426694g0010 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal subunit export factor (ARX1) | 0.1 | OrthoFinder output from all 47 species | |
Mp8g14760.1 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal subunit export factor (ARX1) | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g02808 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g08153 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g11150 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g20368 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g08280 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0055.g014460 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g007200.4.1 | EBP1, ATEBP1,... | pre-60S ribosomal subunit export factor (ARX1) | 0.06 | OrthoFinder output from all 47 species | |
Solyc06g082090.4.1 | EBP1, ATEBP1,... | pre-60S ribosomal subunit export factor (ARX1) | 0.14 | OrthoFinder output from all 47 species | |
Spa_g54762 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.1 | OrthoFinder output from all 47 species | |
Tin_g06544 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e027220_P002 | EBP1, ATEBP1,... | pre-60S ribosomal subunit export factor (ARX1) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e031491_P001 | EBP1, ATEBP1,... | pre-60S ribosomal subunit export factor (ARX1) | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000994 | Pept_M24 | 22 | 226 |
No external refs found! |