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  5. Sam_g18654

Sam_g18654


Description : cytosolic glucanotransferase *(DPE2) & original description: none


Gene families : OG0003670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18654

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001408.12 DPE2 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Cre02.g095126 DPE2 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Ppi_g09248 DPE2 cytosolic glucanotransferase *(DPE2) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004134 4-alpha-glucanotransferase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002044 CBM_fam20 35 119
IPR003385 Glyco_hydro_77 292 919
No external refs found!