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  5. Sam_g18648

Sam_g18648


Description : large subunit alpha of AP-2 cargo adaptor complex & original description: none


Gene families : OG0004347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18648

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00228310 alpha-ADR,... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Adi_g061014 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex &... 0.04 OrthoFinder output from all 47 species
Aev_g01579 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex &... 0.04 OrthoFinder output from all 47 species
Ala_g09713 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Als_g23880 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Aob_g03579 No alias large subunit alpha of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Ceric.31G014300.1 alpha-ADR,... large subunit alpha of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g01966 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01031413001 alpha-ADR Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Gb_29544 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g02150.1 LOC_Os03g02150 large subunit alpha of AP-2 cargo adaptor complex 0.03 OrthoFinder output from all 47 species
Lfl_g02313 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex &... 0.04 OrthoFinder output from all 47 species
Mp2g23200.1 No alias large subunit alpha of AP-2 cargo adaptor complex 0.03 OrthoFinder output from all 47 species
Nbi_g07807 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex &... 0.03 OrthoFinder output from all 47 species
Ore_g35764 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g04673 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex &... 0.05 OrthoFinder output from all 47 species
Smo230624 alpha-ADR Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
Solyc06g074650.3.1 alpha-ADR, Solyc06g074650 large subunit alpha of AP-2 cargo adaptor complex 0.03 OrthoFinder output from all 47 species
Tin_g09458 alpha-ADR large subunit alpha of AP-2 cargo adaptor complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e039078_P002 Zm00001e039078 large subunit alpha of AP-2 cargo adaptor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030131 clathrin adaptor complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR008152 Clathrin_a/b/g-adaptin_app_Ig 752 847
IPR002553 Clathrin/coatomer_adapt-like_N 28 577
IPR003164 Clathrin_a-adaptin_app_sub_C 860 966
No external refs found!