Sam_g18647

Description : large subunit alpha of AP-2 cargo adaptor complex & original description: none

Gene families : OG0004347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004347_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g18647

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00228310	alpha-ADR,...	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.03	OrthoFinder output from all 47 species
Aev_g01579	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
Ala_g09713	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
Als_g23880	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.02	OrthoFinder output from all 47 species
Ceric.31G014300.1	alpha-ADR,...	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021312.53	alpha-ADR	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.02	OrthoFinder output from all 47 species
Cre12.g488850	alpha-ADR	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.02	OrthoFinder output from all 47 species
Dcu_g01966	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.04	OrthoFinder output from all 47 species
GSVIVT01031413001	alpha-ADR	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.05	OrthoFinder output from all 47 species
Gb_29544	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex	0.03	OrthoFinder output from all 47 species
LOC_Os03g02150.1	LOC_Os03g02150	large subunit alpha of AP-2 cargo adaptor complex	0.04	OrthoFinder output from all 47 species
Len_g00748	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.06	OrthoFinder output from all 47 species
Lfl_g02313	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.05	OrthoFinder output from all 47 species
Mp2g23200.1	No alias	large subunit alpha of AP-2 cargo adaptor complex	0.03	OrthoFinder output from all 47 species
Nbi_g07807	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.03	OrthoFinder output from all 47 species
Ore_g35764	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.02	OrthoFinder output from all 47 species
Pir_g14670	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.02	OrthoFinder output from all 47 species
Pnu_g11976	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.02	OrthoFinder output from all 47 species
Ppi_g04673	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.04	OrthoFinder output from all 47 species
Smo230624	alpha-ADR	Vesicle trafficking.clathrin coated vesicle (CCV)...	0.03	OrthoFinder output from all 47 species
Tin_g09458	alpha-ADR	large subunit alpha of AP-2 cargo adaptor complex &...	0.02	OrthoFinder output from all 47 species
Zm00001e000090_P002	Zm00001e000090	large subunit alpha of AP-2 cargo adaptor complex	0.03	OrthoFinder output from all 47 species
Zm00001e039078_P002	Zm00001e039078	large subunit alpha of AP-2 cargo adaptor complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030119	AP-type membrane coat adaptor complex	None	Extended
CC	GO:0030131	clathrin adaptor complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030118	clathrin coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030125	clathrin vesicle coat	IEP	HCCA
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	HCCA
CC	GO:0030132	clathrin coat of coated pit	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008152	Clathrin_a/b/g-adaptin_app_Ig	752	847
IPR002553	Clathrin/coatomer_adapt-like_N	28	579
IPR003164	Clathrin_a-adaptin_app_sub_C	860	966

External Links

No external refs found!

Sam_g18647

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation