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  5. Sam_g18629

Sam_g18629


Description : group-II formin actin filament elongation factor & original description: none


Gene families : OG0000743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g18629
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00219300 AFH14,... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00080420 evm_27.TU.AmTr_v1... Formin-like protein 20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G07740 No alias actin binding 0.02 OrthoFinder output from all 47 species
Adi_g063475 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Adi_g086667 No alias group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Ala_g26800 AFH14 group-II formin actin filament elongation factor &... 0.05 OrthoFinder output from all 47 species
Als_g07481 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Aob_g21727 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038856 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Ceric.04G110000.1 AFH14, Ceric.04G110000 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Ceric.35G034000.1 AFH14, Ceric.35G034000 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001336.15 No alias Cytoskeleton.microfilament network.actin... 0.01 OrthoFinder output from all 47 species
Dcu_g35900 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007958001 No alias Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
LOC_Os02g55150.1 LOC_Os02g55150 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
LOC_Os07g40520.1 LOC_Os07g40520 Formin-like protein 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Lfl_g07846 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
MA_10260569g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_134166g0010 AFH14 Formin-like protein 14 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_4962g0010 No alias Formin-like protein 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_642077g0010 AFH14 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g16788 AFH14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18208 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Pir_g64389 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Pnu_g17899 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Zm00001e003000_P001 Zm00001e003000 group-II formin actin filament elongation factor 0.01 OrthoFinder output from all 47 species
Zm00001e004057_P003 AFH14, Zm00001e004057 group-II formin actin filament elongation factor 0.06 OrthoFinder output from all 47 species
Zm00001e016114_P001 Zm00001e016114 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Zm00001e035462_P001 Zm00001e035462 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 62 436
No external refs found!